| Sat 09 Aug | Hereford United | Home | League | 2-1 | Melligan, Boyd (pen) | 4727 |
| Tue 12 Aug | Ipswich Town | Away | LC r1 | 1-4 | Boyd | 10477 |
| Sat 16 Aug | Peterborough United | Away | League | 0-3 | | 6643 |
| Sat 23 Aug | Carlisle United | Home | League | 0-0 | | 3803 |
| Sat 30 Aug | Brighton & Hove Albion | Away | League | 0-0 | | 6675 |
| Tue 02 Sep | Southend United | Away | JPT s.r1 | 4-2 | Jarvis, Chambers, Melligan, Boyd (pen) | 3499 |
| Sat 06 Sep | Walsall | Away | League | 2-0 | Terry, Boyd (pen) | 4838 |
| Sat 13 Sep | Stockport County | Home | League | 0-3 | | 4473 |
| Sat 20 Sep | Leicester City | Home | League | 1-3 | Chambers | 6448 |
| Fri 26 Sep | Southend United | Away | League | 0-3 | | 9261 |
| Sat 04 Oct | Scunthorpe United | Home | League | 2-2 | Boyd, Purches | 4244 |
| Tue 07 Oct | Brighton & Hove Albion | Away | JPT s.r2 | 2-2 | Jarvis, Boyd (pen) | 2157 |
| Sat 11 Oct | Bristol Rovers | Away | League | 1-2 | Demetriou, Purches | 6425 |
| Sat 18 Oct | Tranmere Rovers | Home | League | 0-1 | | 5568 |
| Tue 21 Oct | Leeds United | Away | League | 1-2 | Morgan | 18990 |
| Sat 25 Oct | Yeovil Town | Away | League | 0-0 | | 4320 |
| Tue 28 Oct | Milton Keynes Dons | Home | League | 1-2 | Mkandawire | 3869 |
| Sat 01 Nov | Hartlepool United | Home | League | 1-0 | Boyd | 3638 |
| Sat 08 Nov | Colchester United | Away | FAC r1 | 1-0 | Demetriou | 4600 |
| Sat 15 Nov | Crewe Alexandra | Away | League | 2-0 | Mkandawire, Boyd | 3872 |
| Sat 22 Nov | Millwall | Home | League | 0-0 | | 6951 |
| Tue 25 Nov | Huddersfield Town | Away | League | 1-0 | Boyd | 10414 |
| Sat 29 Nov | Bradford City | Away | FAC r2 | 2-1 | Demetriou, Granville | 5065 |
| Sat 06 Dec | Northampton Town | Away | League | 1-1 | Melligan | 5039 |
| Sat 13 Dec | Cheltenham Town | Home | League | 1-2 | Boud (pen) | 4510 |
| Sat 20 Dec | Oldham Athletic | Away | League | 1-1 | Demetriou | 6839 |
| Fri 26 Dec | Swindon Town | Home | League | 1-2 | Mkandawire | 4349 |
| Sun 28 Dec | Colchester United | Away | League | 0-1 | | 6290 |
| Sat 10 Jan | Leicester City | Away | League | 0-3 | | 18240 |
| Tue 13 Jan | Sheffield United | Home | FAC r3 | 1-4 | Melligan (pen) | 4527 |
| Sat 17 Jan | Bristol Rovers | Home | League | 1-2 | Boyd | 4262 |
| Tue 20 Jan | Southend United | Home | League | 1-1 | Boyd | 3835 |
| Sat 24 Jan | Scunthorpe United | Away | League | 1-2 | Morgan | 4230 |
| Tue 27 Jan | Milton Keynes Dons | Away | League | 2-1 | Morgan, Purches | 8170 |
| Sat 31 Jan | Yeovil Town | Home | League | 0-1 | | 4597 |
| Sat 07 Feb | Tranmere Rovers | Away | League | 0-0 | | 4892 |
| Sat 14 Feb | Crewe Alexandra | Home | League | 1-0 | Purches | 3705 |
| Sat 21 Feb | Hartlepool United | Away | League | 1-0 | Mkandawire | 3678 |
| Sat 28 Feb | Hereford United | Away | League | 1-2 | Mkandawire | 3286 |
| Tue 03 Mar | Peterborough United | Home | League | 2-3 | McGleish (2, 1 pen) | 3381 |
| Sat 07 Mar | Brighton & Hove Albion | Home | League | 2-1 | McGleish (pen), Thornton | 5885 |
| Tue 10 Mar | Carlisle United | Away | League | 3-1 | Daniels, McGleish, Church | 4536 |
| Sat 14 Mar | Stockport County | Away | League | 1-0 | Church | 5835 |
| Sat 21 Mar | Walsall | Home | League | 0-1 | | 3969 |
| Sat 28 Mar | Oldham Athletic | Home | League | 2-1 | McGleish (pen), Demetriou | 4034 |
| Sat 04 Apr | Cheltenham Town | Away | League | 1-0 | Morgan | 3594 |
| Tue 07 Apr | Leeds United | Home | League | 2-2 | Church (2) | 6943 |
| Sat 11 Apr | Colchester United | Home | League | 2-1 | Daniels, McGleish | 4685 |
| Mon 13 Apr | Swindon Town | Away | League | 1-0 | Demetriou | 7735 |
| Sat 18 Apr | Northampton Town | Home | League | 1-3 | Crowe (og) | 4665 |
| Sat 25 Apr | Millwall | Away | League | 1-2 | Church | 11414 |
| Sat 02 May | Huddersfield Town | Home | League | 1-1 | Morgan | 5371 |
